Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918639.1_cds_XP_016468054.1_60732
CDS Infomation

[gene=LOC107790615] [db_xref=GeneID:107790615] [protein=uncharacterized ATP-dependent helicase C29A10.10c-like isoform X2] [protein_id=XP_016468054.1] [location=join(4908..6288,7496..7675,8075..8170,8269..8431,8506..8638,8718..10481,10617..10883,10967..11089)] [gbkey=CDS]
Sequence

ATGGGTTCTAAAGGAAGGCTGTTGTTTGATCTTAATGAACCCCCTTCTGAGGATGACCAG
AACAATGATGGTGTCCTCTGTTTCCAGCCTCAGAGAGCAGTCCCCTCTTCTAGTACCAAG
ACTTCTGAGTTTTTGGCATCCTCTGTTGATCCTCCGGGGATAGTAAACAATCATGCTTTT
TCCCATGCTTCTTCTGTTTCAGGTTTTCAGCCCTTTGTACGGTTGAAAGGTGCAGAGGCA
TCTAGAGCTCCTGAGGAACAGAAGAGTGCTGGGGCCTCAACTTCCAGTGGTGCTTCATTG
TCTAAATCAAGTCAGGAACATGTATTGAAGGCTGTGCTCCAGCCAGATCTGAACTCTCTC
GATATGCAAACTGCTGAAAAGGAAGAAGGTGAATGGTCTGATGCAGAGGGTTCAACAGAT
GCATATAAAAATTTGGGGATCAATGATAAGTTGAATACTGATGTTGATAAAGCTACGCAT
GAGAAATCAGCAGTTGAGCCGGTGAGTAATAGTGATAAAGTTGGCTCTGCTGATAATGCT
TCTCAGGATAATGAGAAACGGAATGGTGAAATTTCCAATATTTTTTCTTTAGAATTAGAT
CCAGATACAAATGATAGGAAAAGTAATAGTAGCAGAAATTCTGAAACCAGTAATAAAGCT
GATATCGCCATGGATGGTCAGGAGGATTCTGGCCAGGTGCCAAAGCATAGAGAGATTAGA
GGTGCAGAGGCAATTCATGCATTAAAGTGTGCTAACAATTTTGGTAAGCGCCCTAAGATT
GACCAACAAAAGGAAGCAATGTTGGGAAAAAAGCGCAGTAGGCAGACCATGTTTCTTGAT
TTGGAAGACGTTAAGCAGGCAGGTTCAATAAAAAGTACTACTAGACGGCAAAATTTTCCA
GCACCTATTACTCGTATTGTGAAAGAGTCTCGTACCATTCCTCCACCTGCTGAAAAGAAT
GGGGAAAAGCACAGTCAGCAACTTGTCAAAGATATAAAACCAATTGAATCAACTAATGAA
GGCAACTATCCTATGGAATCTAATGATTCTAAATCTGAATCAAGTGCTGATGTGAACCTA
GCACCTCTAGGTCGTCCAAGACGGATGAATAGTTCGATTGACCTCACATCTGAGGCTCAA
ACATCACCTATGCCTAGGCTGAGTTCTTCGAAACATCCCACAGATCTGAGACAAGGTAGA
AATTCACAGGTCCCTGGTAGGAAGCAGCCTGCTCTGACAAGTCAAAGTTCCATGGATCCA
AAATTTGGAGCCAAAAAACCTCCGTCCAAGAAGCAACCTATAGTAAGTAGCCAGTCCCAA
GATACATCTGTGGAACGTCTTATTCAGGAGGTGACGAACGAGAAGTTTTGGCAACATCCA
GATGAAACGGAGCTTCAGTGTGTTCCTGGTCACTTTGAATCTGAGGAAGAGTATGTTAAA
GTGTTTGAACCTTTGCTCTTTGAGGAATGCCGGGCACAGCTGTACAGTACTTGGGAGGAG
ATGGCTGAATCAGGAACCCATGTGAAGGTCCATGTTAAAAACATTGAACGGCGAGAAAGA
GGATGGTACGATGTAATCCTTATTCCAGAATGTGAGTGGAAGTGGTCATTCAAAGAGGGA
GATGTTGCAGTTCTCTCAACTCCACGTCCTGGGTCAGTCCGATCACGGAGAAGCGGAACC
TCAACAGTTGGGGATGAAGAGCAGCCTGAAATAACTGGTCGTGTGGCTGGTACCGTGAGA
CGACACATACCTATTGATACTCGAGATGCTACCGGGGCCATCCTGCACTTCTATGTTGGA
GATCCGTTTGACACCAACAGCAATATTGATAGTGATCACATACTGCGGAAACTACAACCA
AGAGGCATCTGGTTTCTGACTGTTCTGGGTTCTCTAGCAACGACCCAACGAGAGTATGTT
GCTTTACATGCATTTCGGCGTCTTAATCTGCAGATGCAAAATGCAATTCTTCAGCCAAGT
CCGGAGCACTTCCCGAAATATGAAGAGCAGACACCTGCAATGCCCGACTGCTTTACGCCA
AACTTTGTTGATCACTTGCACAGGACATTCAATGGCCCGCAGCTGGGAGCAATCCAATGG
GCTGCAACACATACAGCTGCTGGAACTAATGGTATGACAAAGAGGCAAGATCCCTGGCCT
TTTACTCTAGTTCAGGGGCCACCTGGTACAGGTAAAACACACACTGTGTGGGGAATGCTG
AACGTCATCCATCTTGTTCAGTATCAGCACTATTACACAGCATTGCTCAAGAAACTTGCT
CCTGAAAGCTATAAGCAGAATAATGAGAGTAACTCAGATAATGTTGCTACTGGATCCATT
GATGAAGTCCTGCTAAGCATGGACCAGAATCTCTTCAGAACCCTCCCAAAGCTATGCCCA
AAACCTAGAATGCTTGTCTGCGCTCCTTCAAATGCCGCAACCGACGAGCTTCTTGCACGT
GTTCTTGATCGTGGATTCATCGATGGCGAGATGAAAGTTTATCGGCCTGATGTTGCACGA
GTCGGGGTGGATTCCCAAACGCGTGCTGCCCAAGCAGTCTCTGTAGAGCGGAGAACTGAA
CAGCTTTTGATGAAGAGTCGTGATGAAGTTTATGGGTGGATGCACCAGTTGAGAGCTCGT
GAAGCTCAGTTGTCTCAGCAGATAGCTGGCCTTCAAAGAGAACTAACAGTTGCTGCTGCT
GCTGGTCGTTCACAGGGATCTGTCGGAGTTGACCCTGATGTTCTTATGGCTAGGGACCAA
AACCGAGATTCTCTATTGCAGAACCTTGCGGCAGTGGTTGAGAATAGAGATAAAATATTG
GTGGAAATGTCCCGCCTTCTGATTTTGGAAAGTAGGTTCCGTGGTGGTAACAATTTCAAC
ATGGAGGAAGCTCGTGCTAGTCTGGAGGCTAGTTTTGCCAATGAAGCTGAAATTGTTTTC
ACTACTGTCTCAAGTAGTGGGAGGAAATTGTTCTCTCGTCTCACCCATGGTTTTGACATG
GTAGTCATTGACGAAGCAGCCCAAGCCAGTGAAGTAGCAGTCCTTCCTCCTCTTTCTCTT
GGTGCAGCACGGTGTGTTCTTGTTGGGGATCCGCAGCAGCTTCCTGCTACTGTTATCAGC
AAAGCAGCTGGAACTTTGATGTATAGTAGAAGTCTCTTTGAGAGGTTTCAGCAAGCAGGC
TGCCCAACTATGTTATTATCAGTGCAGTACAGGATGCATCCTCAAATTAGGGATTTTCCA
TCTAGGTACTTTTATCAAGGTCGCCTTACAGATAGTGAAAGTGTTGCTAATCTGCCTGAT
GAAAGTTATTACAAGGATCCTTTACTAAAGCCTTACATCTTTTATGACATTACACATGGT
CGAGAATCACATAGAGGTGGATCTGTTTCATATCAGAATACCCACGAAGCGCAGTTCTGT
CTTCGTTTGTATGAGCATCTTCAAAAAACTTGTAAATCTGCTGGTGTTGGGAAAGTTACT
GTAGGTATAATCACTCCTTACAAGCTGCAACTTAAATGCCTTCAACGGGAATTCGCGGAT
GTTTTAAATTCTGAAGAAGGAAAAGACATCTACATAAATACTGTGGATGCTTTCCAGGGT
CAAGAGCGTGATGTTATTATAATGTCATGTGTGCGTGCCTCAAACCATGGGGTAGGGTTT
GTTGCAGATATACGGCGAATGAACGTTGCTCTTACTCGTGCAAGAAGAGCTCTTTGGGTA
ATGGGAAATGCCAATGCTCTGGTGAAATCAGAAGATTGGGCTGCATTGATTGCTGATGCC
AAAACCAGAAAATGTTACATGGACATGGATTCTTTGCCTAAAGAGTTCTTGCTACCCAGG
TCAGCTTCTCATGCTCCTCCACCGACCAAGATGGCTAATAATAGAGGTTACAGATCTTCC
TTACGGCACAGAATATATGATACACACATGGAGTCCAGGTCAGGAACACCTTCAGAAGAT
GATGAAAAGCCAAATGCGTTACAGAGATTCCTGGCAATATGGCATACAGAGGAGGCAAAA
TACAGCTGGAATTGGGAGAAGAGATCTGTAGCTGATGCCCGTGAATGTGTGCCATGCATC
ATGGGGACCAACCATTTTAGTTCCTGA

Peptide Sequence

PEP ID

XP_016468054.1
PEP Infomation

PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like isoform X2 [Nicotiana tabacum]
Sequence

MGSKGRLLFDLNEPPSEDDQNNDGVLCFQPQRAVPSSSTKTSEFLASSVDPPGIVNNHAF
SHASSVSGFQPFVRLKGAEASRAPEEQKSAGASTSSGASLSKSSQEHVLKAVLQPDLNSL
DMQTAEKEEGEWSDAEGSTDAYKNLGINDKLNTDVDKATHEKSAVEPVSNSDKVGSADNA
SQDNEKRNGEISNIFSLELDPDTNDRKSNSSRNSETSNKADIAMDGQEDSGQVPKHREIR
GAEAIHALKCANNFGKRPKIDQQKEAMLGKKRSRQTMFLDLEDVKQAGSIKSTTRRQNFP
APITRIVKESRTIPPPAEKNGEKHSQQLVKDIKPIESTNEGNYPMESNDSKSESSADVNL
APLGRPRRMNSSIDLTSEAQTSPMPRLSSSKHPTDLRQGRNSQVPGRKQPALTSQSSMDP
KFGAKKPPSKKQPIVSSQSQDTSVERLIQEVTNEKFWQHPDETELQCVPGHFESEEEYVK
VFEPLLFEECRAQLYSTWEEMAESGTHVKVHVKNIERRERGWYDVILIPECEWKWSFKEG
DVAVLSTPRPGSVRSRRSGTSTVGDEEQPEITGRVAGTVRRHIPIDTRDATGAILHFYVG
DPFDTNSNIDSDHILRKLQPRGIWFLTVLGSLATTQREYVALHAFRRLNLQMQNAILQPS
PEHFPKYEEQTPAMPDCFTPNFVDHLHRTFNGPQLGAIQWAATHTAAGTNGMTKRQDPWP
FTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTALLKKLAPESYKQNNESNSDNVATGSI
DEVLLSMDQNLFRTLPKLCPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVAR
VGVDSQTRAAQAVSVERRTEQLLMKSRDEVYGWMHQLRAREAQLSQQIAGLQRELTVAAA
AGRSQGSVGVDPDVLMARDQNRDSLLQNLAAVVENRDKILVEMSRLLILESRFRGGNNFN
MEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSL
GAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFP
SRYFYQGRLTDSESVANLPDESYYKDPLLKPYIFYDITHGRESHRGGSVSYQNTHEAQFC
LRLYEHLQKTCKSAGVGKVTVGIITPYKLQLKCLQREFADVLNSEEGKDIYINTVDAFQG
QERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNANALVKSEDWAALIADA
KTRKCYMDMDSLPKEFLLPRSASHAPPPTKMANNRGYRSSLRHRIYDTHMESRSGTPSED
DEKPNALQRFLAIWHTEEAKYSWNWEKRSVADARECVPCIMGTNHFSS

Transcript Sequence

Gene sequence data has not been registered.